Sequence dependence and direct measurement of crossover isomer distribution in model Holliday junctions using NMR spectroscopy
A 32-base-pair model of the Holliday junction (HJ) intermediate in genetic recombination has been prepared and analyzed in-depth by 2D and 3D 1H NMR spectroscopy. This HJ (J2P1) corresponds to a cyclic permutation of the base pairs at the junction relative to a previously studied HJ [J2; Chen, S.-M., and Chazin, W. J. (1994) Biochemistry 33, 11453-11459], designed to probe the effect of the sequen