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A p-ary MDPC scheme.

The McEliece public key cryptosystem is an attractive general construction that has received extensive attention over the years. Recently, a very promising version called QC-MDPC, was proposed. By using binary quasi-cyclic codes, the size of the public key can be decreased significantly. The decryption step involves iterative decoding of moderate density parity check codes (MDPC). In this paper we

A key recovery attack on MDPC with CCA security using decoding errors

Algorithms for secure encryption in a post-quantum world are currently receiving a lot of attention in the research community, including several larger projects and a standardization effort from NIST. One of the most promising algorithms is the code-based scheme called QC-MDPC, which has excellent performance and a small public key size. In this work we present a very efficient key recovery attack

Minimizing the Maximal Rank

In computer vision, many problems can be formulated as finding a low rank approximation of a given matrix. Ideally, if all elements of the measurement matrix are available, this is easily solved in the L2-norm using factorization. However, in practice this is rarely the case. Lately, this problem has been addressed using different approaches, one is to replace the rank term by the convex nuclear no

Systematics and origin of moths in the subfamily Arctiinae (Lepidoptera, Erebidae) in the Neotropical region

The availability of standard protocols to obtain DNA sequences has allowed the inference of phylogenetic Hypotheses for many taxa, including moths. We here have inferred a phylogeny using maximum-Likelihood and Bayesian approaches for a species-rich group of moths (Erebidae, Arctiinae), with strong emphasis on Neotropical genera collected in different field campaigns in the Atlantic Forest of Braz

Putting Parasemia in its phylogenetic place : A molecular analysis of the subtribe Arctiina (Lepidoptera)

Despite being popular among amateur and professional lepidopterologists and posing great opportunities for evolutionary research, the phylogenetic relationships of tiger moths (Erebidae: Arctiinae) are not well resolved. Here we provide the first phylogenetic hypothesis for the subtribe Arctiina with the basic aim of clarifying the phylogenetic position of the Wood Tiger Moth Parasemia plantaginis

Molecular phylogeny and generic-level taxonomy of the widespread palaeotropical 'Heteropsis clade' (Nymphalidae : Satyrinae: Mycalesina)

The mycalesine butterfly genus Heteropsis Westwood, 1850 (Satyrinae: Mycalesina) has recently been conceived to be represented in three major palaeotropical regions (Madagascar, Africa and Asia), but there has been no formal taxonomic treatment covering this entire group. Studies aimed at understanding the evolutionary success of Mycalesina in the Old World tropics have been hampered by the lack o

PCR primers for 30 novel gene regions in the nuclear genomes of Lepidoptera

We report primer pairs for 30 new gene regions in the nuclear genomes of Lepidoptera that can be amplified using a standard PCR protocol. The new primers were tested across diverse Lepidoptera, including nonditrysians and a wide selection of ditrysians. These new gene regions give a total of 11,043 bp of DNA sequence data and they show similar variability to traditionally used nuclear gene regions

'Species' from two different butterfly genera combined into one : Description of a new genus of Euptychiina (Nymphalidae: Satyrinae) with unusually variable wing pattern

Sepona Freitas and Barbosa, gen. nov. is proposed for the Neotropical satyrine butterfly species Euptychia punctata Weymer, 1911 and its junior subjective synonyms Euptychia griseola Weymer, 1911 and Taygetis indecisa Ribeiro, 1931. The new genus has a distinctive wing pattern and shape of the valvae in the male genitalia, the latter being a unique autapomorphy within the subtribe Euptychiina. Bas

On oscillations and flutterings-A reply to Hamm and Fordyce

The diversification of plant-feeding insects is seen as a spectacular example of evolutionary radiation. Hence, developing hypotheses to explain this diversification, and methods to test them, is an important undertaking. Some years ago, we presented the oscillation hypothesis as a general process that could drive diversification of this and similar interactions, through repeated expansions and co

Network analysis of skin tumor progression identifies a rewired genetic architecture affecting inflammation and tumor susceptibility

BACKGROUND: Germline polymorphisms can influence gene expression networks in normal mammalian tissues and can affect disease susceptibility. We and others have shown that analysis of this genetic architecture can identify single genes and whole pathways that influence complex traits, including inflammation and cancer susceptibility. Whether germline variants affect gene expression in tumors that h

Identification of Hipk2 as an essential regulator of white fat development

Homeodomain-interacting protein kinase 2 (Hipk2) has previously been implicated in the control of several transcription factors involved in embryonic development, apoptosis, cell proliferation, and tumor development, but very little is understood about the exact mechanisms through which Hipk2 influences these processes. Analysis of gene expression in normal tissues from genetically heterogeneous m

Gene Expression Architecture of Mouse Dorsal and Tail Skin Reveals Functional Differences in Inflammation and Cancer

Inherited germline polymorphisms can cause gene expression levels in normal tissues to differ substantially between individuals. We present an analysis of the genetic architecture of normal adult skin from 470 genetically unique mice, demonstrating the effect of germline variants, skin tissue location, and perturbation by exogenous inflammation or tumorigenesis on gene signaling pathways. Gene net

High-throughput DNA extraction of forensic adhesive tapes

Tape-lifting has since its introduction in the early 2000′s become a well-established sampling method in forensic DNA analysis. Sampling is quick and straightforward while the following DNA extraction is more challenging due to the “stickiness”, rigidity and size of the tape. We have developed, validated and implemented a simple and efficient direct lysis DNA extraction protocol for adhesive tapes

Behavioral Spillovers across Prosocial Alternatives

This thesis contributes to the economic literature on prosocial behavior. It includes three papers, all of which relate to the issue of policy-driven spillovers across prosocial alternatives. For example, the common fundraising practice of donation matching could affect contributions through other channels; similarly, recycling policy could affect household efforts on other environmental activitie

On the Performance of Vehicular Communications with a Measurement-Based Radio Propagation Model

The choice of channel propagation model used for the simulation-based study of Vehicular Ad hoc NETworks (VANETs) plays a key role in the accuracy of conclusions drawn about the performance of applications proposed for these networks. Relying on simplistic channel models, as frequently practised in previous works, leads either to pessimistic or optimistic conclusions. In the view of this, in this

Encouraged Intrusion and the Entering of a Subordinate Consumption Field

In order to explore consumer culture’s potential to change social relations, this investigation immerses into the growing consumer culture of foodies occupying the historically feminine space of domestic cooking. It offers a tentative theory on the entering of subordinate consumption fields in contexts where the entering is sanctioned by cultural authorities.